Phylogenomic analysis reveals genome-wide purifying selection on TBE transposons in the ciliate Oxytricha

Table 1 Genomic distribution of TBEs in the Oxytricha germline genome

	Complete								Partial			Total
	#	Length (Mb)	% of complete TBEs by length	TIR			Near MDSs		#	Length (Mb)	% of partial TBEs by length	Length (Mb)	% of all TBEs by length
	#	Length (Mb)	% of complete TBEs by length	2	1	0	#	% total copies	#	Length (Mb)	% of partial TBEs by length	Length (Mb)	% of all TBEs by length
TBE1	2502	9.9	24.75 %	2005	228	269	521	28.2 %	6216	6.5	24.8 %	16.4	24.8 %
TBE2.1	2484	10.0	25 %	2166	58	260	354	19.2 %	3129	3.9
TBE2.2	1087	4.3	10.75 %	916	30	141	197	10.7 %	1146	1.3
TBE2	3571	14.3	35.75 %	3082	88	401	551	29.9 %	9898 (TBE2.1 + TBE2.2 + unclassified partial TBE2)	10.5	40.1 %	24.8	37.5 %
TBE3	3946	15.8	39.5 %	3148	358	440	773	41.9 %	8588	9.2	35.1 %	25.0	37.7 %
Total	10,019	40.0	100 %	8235	674	1110	1845	100 %	24,702	26.2	100 %	66.2	100 %

ISSN: 1759-8753