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Fig. 2 | Mobile DNA

Fig. 2

From: Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) of Porphyromonas gingivalis

Fig. 2

MEME motif analysis block output of the 19 BrickBuilt elements in P. gingivalis strain ATCC 33277. Entire element FASTA sequences were used as the input. Settings for analysis were: Distribution of motif occurrence as ‘any number of repetitions’, number of different motifs as ‘5’, minimum motif with as ‘23’, and maximum motif width as ‘200’. Dark and light blue blocks correspond to 23 nucleotide repeat regions, red blocks to leader regions and purple blocks to tail regions. Yellow blocks, potentially representing a 5th motif, were only found on the positive strand and had the lowest e-values associated with their significance scores

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Mobile DNA

ISSN: 1759-8753