Table 1 Taxa examined in this study, data used and basic statistics describing Ves content and Ves insertions used for our analysis of subfamilies
From: Differential SINE evolution in vesper and non-vesper bats
Taxon | Abbreviation | Family, subfamily | Data source | Bases queried | Total Ves bases identified | % Ves-derived bases | Total Ves fragments identified | Full-length Ves insertions analyzed in COSEG |
|---|---|---|---|---|---|---|---|---|
Artibeus lituratus | Alit | Phyllostomidae, Stenodermatinae | SS | 101,137,176 | 2,510,325 | 2.48% | 18,038 | 5,964 |
Corynorhinus rafinesquii | Craf | Vespertilionidae, Vespertilioninae | SS | 108,013,590 | 4,191,322 | 3.88% | 33,888 | 8,068 |
Eptesicus fuscus | Efus | Vespertilionidae, Vespertilioninae | WGS | 388,423,918 | 17,126,373 | 4.41% | 97,440 | 15,000 |
Lasiurus borealis | Lbor | Vespertilionidae, Vespertilioninae | SS | 71,255,672 | 3,431,237 | 4.82% | 25,494 | 7,624 |
Myotis austroriparius | Maus | Vespertilionidae, Myotinae | SS | 21,992,128 | 1,078,155 | 4.90% | 8,720 | 2,143 |
M. brandtii | Mbra | Vespertilionidae, Myotinae | WGS | 533,920,351 | 28,106,987 | 5.26% | 160,836 | 15,000 |
M. davidii | Mdav | Vespertilionidae, Myotinae | WGS | 420,014,318 | 23,723,693 | 5.65% | 137,294 | 15,000 |
M. lucifugus | Mluc | Vespertilionidae, Myotinae | WGS | 497,001,341 | 23,480,719 | 4.72% | 129,921 | 15,000 |
Nycticeius humeralis | Nhum | Vespertilionidae, Vespertilioninae | SS | 34,287,171 | 2,250,938 | 6.56% | 18,329 | 4,218 |
Perimyotis subflavus | Psub | Vespertilionidae, Vespertilioninae | SS | 29,578,028 | 1,290,520 | 4.36% | 10,669 | 2,419 |
Pteronotus parnellii | Ppar | Mormoopidae | WGS | 265,642,944 | 5,805,924 | 2.19% | 35,450 | 15,000 |