454 | Illumina | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Ocum | Ocre | Opan | Ogra | Ogra (IND) | Ogra (CD) | Oden (CD) | Oaus (CD) | Orap (CD) | Orap (IND) | |
Gypsy | 17.02 | 21.44 | 24.16 | 28.34 | 23.64 | 27.62 | 36.25 | 39.64 | 30.47 | 27.62 |
Copia | 16.01 | 21.42 | 18.82 | 18.41 | 21.63 | 20.52 | 22.00 | 20.15 | 16.06 | 13.89 |
Unclassified LTRs | - | 0.13 | 0.69 | 1.71 | 2.46 | 0.30 | 0.19 | 0.14 | 0.25 | 1.64 |
LINE/SINE | 0.41 | 0.56 | 1.04 | 0.47 | 0.54 | 0.64 | 0.54 | 0.76 | 0.57 | 0.82 |
Unclassified RNA TEs | - | - | - | - | - | 0.04 | 0.02 | 0.09 | 0.43 | 0.06 |
En-Spm | 0.55 | 0.74 | 1.04 | 0.65 | 0.77 | 0.84 | 0.81 | 0.57 | 1.23 | 1.30 |
hAT | 0.06 | 0.12 | 0.24 | 0.11 | 1.40 | 0.33 | 0.09 | 0.12 | 0.27 | 0.53 |
Mutator | 0.11 | 0.11 | 0.28 | 0.23 | 0.49 | 0.18 | 0.20 | 0.23 | 0.24 | 0.57 |
RC/Helitron | 0.06 | 0.22 | 0.12 | - | - | 0.25 | 0.16 | 0.09 | 0.18 | - |
PIF-Harbinger | - | - | 0.01 | 0.04 | - | - | - | - | - | - |
Tc1-Mariner | - | - | - | 0.03 | 0.05 | - | - | - | - | - |
Unclassified DNA TEs | - | - | - | - | 0.21 | 0.48 | 0.63 | 0.42 | 0.17 | - |
rDNA | 0.67 | 1.74 | 1.34 | 1.36 | 1.51 | 0.59 | 2.03 | 1.17 | 1.28 | 1.59 |
Satellites | 3.1 | 3.88 | 2.28 | 5.08 | 14.41 | 13.45 | 11.23 | 12.92 | 2.59 | 9.40 |
Group II introns | - | - | - | - | 0.09 | - | - | - | - | - |
Unclassified repeats | 7.57 | 4.57 | 6.06 | 3.71 | 1.48 | 2.12 | 2.45 | 2.23 | 1.70 | 0.26 |
Total | 45.57 | 54.94 | 56.09 | 60.13 | 68.68 | 67.34 | 76.59 | 78.53 | 55.42 | 57.69 |