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Table 1 Exon/intron boundaries of the 34 analyzed CACTA transposases with more than one exon.

From: Analysis of CACTA transposases reveals intron loss as major factor influencing their exon/intron structure in monocotyledonous and eudicotyledonous hosts

 

1

2

3

4

5

EnSpm12_Fves

462 | 564G

    

C

718 | 771I

    

EnSpm10_Fves

826 | 846

    

Joey

842 | 893II

    

Janus

837 | 894II

    

F

846 | 894II

    

G

847 | 894II

    

Norman

879 | 921III

    

En1

879 | 925III

    

Alfred

885 | 925III

    

H

838 | 972

    

EnSpm3_Vvin

821 | 894II

856 | 925III

   

EnSpm8_Sbic

754 | 783I

976 | 0

   

Storm

827 | 782I

951 | 0

   

Sherman

831 | 782I

954 | 0

   

J

495 | 521

750 | 885

   

EnSpm2_Mdom

755 | 782I

886 | 893II

   

Baldur

731 | 782I

837 | 895II

   

I

834 | 782I

954 | 910

   

Isidor

857 | 894II

892 | 920III

   

Radon

841 | 894II

877 | 921III

   

Rufus

851 | 894II

887 | 921III

   

EnSpm13_Vvin

821 | 894II

856 | 925III

   

EnSpm5_Vvin

824 | 894II

859 | 925III

   

Isaac

861 | 894II

900 | 925III

   

Sandro

744 | 782I

851 | 928III

   

Balduin

850 | 895II

890 | 930III

   

DOPPIA

843 | 894II

890 | 936III

   

K

744 | 7,82I

850 | 936III

   

Horace

712 | 711

981 | 1,054

   

EnSpm4_Fves

812 | 0

992 | 0

1,244 | 0

  

EnSpm3_Fves

681 | 0

770 | 781I

919 | 0

  

Seamus

730 | 782I

833 | 892II

878 | 925III

  

Dario

726 | 711

842 | 839

895 | 890III

  

Aron

851 | 833

899 | 879II

1,013 | 1,060

  

Korbin

510 | 567G

718 | 782I

814 | 894II

853 | 0

 

Chester

520 | 563G

728 | 777I

823 | 889II

858 | 920III

 

Baron

522 | 568G

730 | 781I

825 | 893II

861 | 925III

 

EnSpm8_Fves

158 | 163

830 | 893II

975 | 0

1,219 | 0

1,500 | 0

ATENSPM6_Athal

802 | 809

918 | 922III

978 | 981

1,011 | 1,012

1,141 | 0

  1. The positions are relative to the beginning of the transcription start and given as follows:On the protein sequence | on the trimmed multiple sequence alignment (MSA). 0 and numbers in italic indicate boundaries with GUIDANCE scores below 0.804 and removed in the final MSA. Superscripts indicate Regions I to III and G cluster, respectively (Figure 1).