Figure 7From: Modular organization and reticulate evolution of the ORF1 of Jockey superfamily transposable elementsRNA recognition motif (RRM) domains fall into six clusters. All RRM domains were clustered using CLANS with Blastp and default values [28]. Where two RRM domains were identified, the 5’ domain is labeled ‘U’ for upstream, the 3’ domain ‘D’ for downstream. Single dots are single sequences and are color-coded by subgroup. ORF2 subgroup numbers are shown in circles. Dotted lines connecting sequences represent the confidence in the Blastp hit and are colored from dark to light grey; lightest is the lowest, darkest is the highest.Back to article page