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Figure 7 | Mobile DNA

Figure 7

From: Modular organization and reticulate evolution of the ORF1 of Jockey superfamily transposable elements

Figure 7

RNA recognition motif (RRM) domains fall into six clusters. All RRM domains were clustered using CLANS with Blastp and default values [28]. Where two RRM domains were identified, the 5’ domain is labeled ‘U’ for upstream, the 3’ domain ‘D’ for downstream. Single dots are single sequences and are color-coded by subgroup. ORF2 subgroup numbers are shown in circles. Dotted lines connecting sequences represent the confidence in the Blastp hit and are colored from dark to light grey; lightest is the lowest, darkest is the highest.

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