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Table 3 Percent coverage of each chromosome of the most represented TE families using the -- strict option

From: “One code to find them all”: a perl tool to conveniently parse RepeatMasker output files

Chromosome

L1

Alu

ERV1

ERVL-MaLR

Total

Chr 1

8.73

10.42

2.07

1.76

22.98

Chr 2

10.18

8.80

2.13

2.11

23.22

Chr 3

11.59

8.59

2.46

2.09

24.73

Chr 4

12.38

7.28

2.80

2.54

25.00

Chr 5

11.89

8.10

2.17

2.38

24.54

Chr 6

11.21

8.71

2.47

2.13

24.52

Chr 7

9.79

11.11

2.47

1.89

25.26

Chr 8

10.64

8.56

2.48

2.11

23.79

Chr 9

8.93

8.88

1.81

1.73

21.35

Chr 10

9.19

10.55

2.19

1.78

23.71

Chr 11

10.84

9.07

2.31

1.92

24.14

Chr 12

10.02

11.22

2.35

1.98

25.57

Chr 13

8.61

6.39

2.17

2.08

19.25

Chr 14

8.78

8.62

1.96

1.96

21.32

Chr 15

7.41

9.61

1.46

1.25

19.73

Chr 16

5.51

14.13

1.63

1.33

22.60

Chr 17

5.43

17.91

1.63

1.27

26.24

Chr 18

9.07

7.97

2.18

2.01

21.23

Chr 19

5.08

24.07

2.90

0.87

32.92

Chr 20

7.13

11.71

1.61

1.49

21.94

Chr 21

6.17

6.65

1.98

2.23

17.03

Chr 22

3.33

11.98

1.06

0.83

17.20

Chr X

20.69

7.76

3.38

2.78

34.61

Chr Y

6.96

3.40

3.27

0.69

14.32

  1. TE, transposable element.
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Mobile DNA

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