Figure 2From: The Tc1/mariner transposable element family shapes genetic variation and gene expression in the protist Trichomonas vaginalisT. vaginalis population structure based on 19 Tvmar1 insertions. (A) Principal component analysis (PCA) using seven geographical groups. A shape represents each isolate and color represents genetic type 1 and 2. The first three PCA axes explain the highest percentage of the variation (60.81% first, 18.94% second and 10.53% third). (B) Structure analysis of T. vaginalis isolates using K = 2, determined as the optimal K number. Each individual is represented by a thin vertical line, which is partitioned into K segments that represent its estimated population group membership fractions. Black lines separate groups of isolates. AUS, Australia; ITA, Italy; LST, laboratory strains; MEX, Mexico; PCA, principal component analysis; PNG, Papua New Guinea; SAF, South Africa; USA, United Sates of America.Back to article page