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Table 3 Integrase recognition motifs

From: Conserved structure and inferred evolutionary history of long terminal repeats (LTRs)

Name 5 INT motif 3 INT motif
Zam AGTTAYRK TAAYT
Mag C TGTNATRT AYANAACA
Mag A TGTTRKR RMRWMYAYAACA
CsRN1 TGTGGYG MSYYAMA
Sushi TGTYANR CNTNACA
rGmr1 TGTNANR CGTNACA
Sire TGTTRRN(3)TAA TT(20)CYAACA
Retrofit TGTTARAMNAT(1)AT ATT(1)TTYA(1)CA
HML TGTNGGGRAARG CCCNRCA
Gamma TGWAGNMRR NNYNACA
Class III endogenous retroviruses TGT ACA