Figure 7
From: In and out of the rRNA genes: characterization of Pokey elements in the sequenced Daphnia genome
Sequences flanking the TTAA target site of Pokey and Pokey -derived miniature inverted repeat transposable elements (m Pok) . WebLogo was used to analyze 26 bp upstream and 26 bp downstream of the TTAA site. The analysis is based on 130 unique sequences upstream and 162 sequences downstream of the target site from the Daphnia genome. The corresponding sequence in the Daphnia 28S gene is shown below the graph. Positions in the 28S gene that match preferred positions in genomic insertion sites are in bold type.