From: Towards a more accurate annotation of tyrosine-based site-specific recombinases in bacterial genomes
Genbank Acc. No. | Plasmids | sTBSSR CLSK No. | TnpB ID | LTBSSR CLSK No. | TnpA ID | TnpC |
---|---|---|---|---|---|---|
NC_008270 | Rhodococcus sp. RHA1 pRHL2 | 636892 | 36 | 636891 | 41 | none |
NC_008697 | Nocardioides sp. JS614 pNOCA01 | 636892 | 36 | 636891 | 41 | none |
NC_008537 | Arthrobacte r sp. FB24 plasmid 1 | 636892 | 36 | 636891 | 41 | none |
NC_003903 | Streptomyces coelicolor pSCP1 (2 copies) | 636892 | 36 | 636891 | 41 | none |
NC_007491 | Rhodococcus erythropolis PR4 pREL1 | 636892 | 36 | 636891 | 41 | none |
NP_898763 | R. erythropolis pBD2 | 636892 | 36 | 636891 | 41 | none |
NC_008271 | Rhodococcus sp. RHA1 pRHL3 | 523288 | 33 | 2316403 | 27 | 2316404 |
NC_007491 | R. erythropolis PR4 pREL1 | 2526550 | 33 | none | 27 | 2526549 |
NP_898763 | R. erythropolis pBD2 | 647580 | 33 | 647579 | 27 | 647578 |
NP_898763 | R. erythropolis pBD2 | 826662 | 33 | none | 27 | 647587 |
NC_005707 | Bacillus cereus pBc10987 | no cluster | 33 | 2462320 | 53 | 925958 |
NC_009426 | Novosphingobium aromaticivorans DSM 12444 pNL1 | 782394 | 62 | 782395 | 53 | 782393 |
NC_009427 | N. aromaticivorans DSM 12444 pNL2 (2 copies) | 782394 | 62 | 782395 | 53 | 782393 |
NC_009339 | Mycobacterium gilvum PYR-GCK pMFLV01 | no cluster | 33 | no cluster | 27 | no cluster |
NC_009339 | M. gilvum PYR-GCK pMFLV01 | 647579 | 33 | 730723 | 27 | 647580 |
NC_008147 | Mycobacterium sp. MCS plasmid 1 | 776375 | 33 | 776376 | 27 | 772808 |
NC_008704 | Mycobacterium sp. KMS pMKMS02 | 776375 | 33 | 776376 | 27 | 772808 |
NC_004719 | Streptomyces avermitilis MA-4680 SAP1* | no cluster | 33 | none | _ | none |
Genbank Acc. No. | Chromosomes | sTBSSR CLSK No. | TnpB ID | LTBSSR CLSK No. | TnpA ID | TnpC |
NC_008596 | Mycobacterium smegmatis str. MC2 155 | 776375 | _ | 776376 | _ | 772808 |
NC_008711 | Arthrobacter aurescens TC1 | 776375 | _ | 776376 | _ | 772808 |
NC_012803 | Micrococcus luteus NCTC 2665 (2 copies) | 776375 | _ | 776376 | _ | 772808 |
NC_008705 | Mycobacterium sp. KMS | 776375 | _ | 776376 | _ | 772808 |
NC_008726 | Mycobacterium vanbaalenii PYR-1 | 776375 | _ | 776376 | _ | 772808 |
NC_013235 | Nakamurella multipartita DSM 44233 (7 copies) | 647580 | _ | 647579 | _ | 647578 |
NC_010397 | Mycobacterium abscessus ATCC 19977 (2 copies) | 647580 | _ | 647579 | _ | 730718 |
NC_009338 | Mycobacterium gilvum PYR-GCK | 647580 | _ | 647579 | _ | 647578 |
NC_009077 | Mycobacterium sp. JLS | 647580 | _ | 647579 | _ | 730718 |
NC_008726 | M. vanbaalenii PYR-1 (4 copies) | 647580 | _ | 647579 | _ | 647578 |
NC_008726 | M. vanbaalenii PYR-1 | 647580 | _ | 647579 | _ | Â |
NC_008726 | M. vanbaalenii PYR-1 | 647580 | _ | 647579 | _ | none |
NC_008595 | Mycobacterium avium 104 | 647580 | _ | 647579 | _ | none |
NC_008268 | Rhodococcus jostii RHA1 | 647580 | _ | 647579 | _ | none |