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Table 3 Pokey and rRNA gene number in two clonal lines of Daphnia pulex

From: Copy number variation of ribosomal DNA and Pokey transposons in natural populations of Daphnia

 

Gene Region

Isolate1

18S

t28S2

u28S3

r Pokey4

g Pokey5

r Inserts6

Tif:Gtp 7

Log50-11

301

540.5

445

2.5

37

93

0.84

Log50-12

245.5

362.5

349

4

25.5

9.5

0.88

  1. 1. Log50 is the isolate from which the D. pulex genome sequence was generated [34]. Log50-11 and Log50-12 are clonally-propagated lines derived from Log50 [22].
  2. 2. Denotes total 28S genes.
  3. 3. Denotes uninserted 28S genes.
  4. 4. Denotes Pokey in 28S genes.
  5. 5. Denotes Pokey in other genome sites. Calculated as (total Pokey - rPokey).
  6. 6. Denotes other rDNA inserts, calculated as (t28S-u28S-rPokey).
  7. 7. Number of Tif genes relative to Gtp genes