From: Effect of attC structure on cassette excision by integron integrases
Clone pLQ | Upstream att site | Cassette | Integron integrases (IntIs) | ||||
---|---|---|---|---|---|---|---|
 |  |  | IntI1 | IntI3 | IntI2*179E | SonIntIA | VchIntIA |
423 | attI1 | ant(3'')-Ia T-N6-G | ++ | - | - | - | - |
424 | attI2 | dfrA1 A-N7-8-C | - | - | + | - | - |
425 | attI3 | bla IMP-1 T-N6-G* | - | - | - | - | - |
426 | attC dfrA1 A-N7-8-C | ant(3'')-Ia T-N6-G | + | - | + | + | - |
427 | attI1 N/A | dfrA1 A-N7-8-C | - | - | - | - | - |
428 | attC ant(3'')-Ic T-N6-G | aac(6')-Ia-orfG + orfH T-N6-G | +++ | +++ | +++ | +++ | +++ |
429 | attI1 N/A | ant(3'')-Ic T-N6-G | ++ | - | - | - | - |
430 | attC dfrA1 A-N7-8-C | sat2 T-N6-G | + | + | ++ | ++ | - |
431 | attC aac(6')-Ib TC-N6-G | bla oxa10 T-N6-G | - | - | - | - | - |
437 | attC ant(3'')-Ic T-N6-G | dfrA1 A-N7-8-C | - | - | + | - | - |
438 | attC ant(3'')-Ic T-N6-G | bla IMP-1 T-N6-G* | +++ | +++ | +++ | +++ | - |
439 | attI1 N/A | bla IMP-1 T-N6-G* | + | - | - | - | - |
440 | attI1 N/A | aac(6')-Ia-orfG + orfH T-N6-G | +++ | - | - | - | - |
441 | attI2 N/A | aac(6')-Ia-orfG + orfH T-N6-G | ++ | - | +++ | + | - |
442 | attI3 N/A | aac(6')-Ia-orfG + orfH T-N6-G | + | - | - | - | + |
443 | attC ant(3'')-Ic T-N6-G | ant(3'')-Ia T-N6-G | +++ | +++ | +++ | +++ | +++ |
444 | attC dfrA1 A-N7-8-C | dfrA1 A-N7-8-C | + | + | +++ | +++ | - |
445 | attC aac(6')-Ia -orfG T-N6-G | ant(3'')-Ia T-N6-G | +++ | +++ | ++ | ++ | ++ |
446 | attC blaIMP-1 T-N6-G | aac(6')-Ia-orfG + orfH T-N6-G | +++ | +++ | +++ | +++ | - |