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Table 1 Computationally-derived loci from assembled primate genomes.

From: Heads or tails: L1 insertion-associated 5' homopolymeric sequences

 

H

C

O

Rh

Combined

poly(T)

169

183

290

276

918

poly(A)

522

646

809

909

2886

poly(C)

1

4

0

0

5

Poly(G)

4

9

8

1

22

Loci

696

842

1107

1186

3831

  1. Computational filters were used to detect loci based on the proximity (<20 bp) of simple repeats to the 5' end of an L1.