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Table 5 Sadhu elements >350 base pairs (bp) in the Arabidopsis lyrata genome.

From: The structure, organization and radiation of Sadhu non-long terminal repeat retroelements in Arabidopsis species

Sequence name JGI scaffold coordinates (approximate) Orientation Length (bp) of Sadhu sequence Target site duplication (bp) Full length? Percentage identity to nearest A. thaliana Sadhu
AlSadhu1-1 7:7309496-7310418 - 948 18 Yes 86
AlSadhu1-2 8:11697563-11698467 + 922 12 Yes 86
AlSadhu1-3 6:22517373-22518173 + 957 14 Yes 84
AlSadhu1-4 3:1662010-1662618 - 1009 14 Yes 81
AlSadhu1-5 1:24954753-24955365 + 924 ND Yes 84
AlSadhu1-6 4:841417-842023 + 965 16 Yes 82
AlSadhu1-6 3:13675822-13676434 + 927 16 Yes 84
AlSadhu1d 2:14298861-14299465 + 827 ND No 81
AlSadhu3-1 7:12620425-12621361 + 928 18 Yes 86
AlSadhu5-1 7:17697122-17698008 + 879 11 Yes 85
AlSadhu5d 6:5062639-5062768 - 791 ND No 72
AlSadhu5d2 6:25041036-25041746 + 804 ND No 73
AlSadhu5d3 5:4156620-4157046 - 395 ND No 71
AlSadhu6-1 3:21898960-21899646 - 899 14 Yes 77
AlSadhu6-2 2:14183205-14186662 + 887* 15 Yes 77
AlSadhu6-3 8:5795744-5796493 + 927 ND Yes 78
AlSadhu7-1 7:4360460-4360769 - 901 16 Yes 79
AlSadhu8-1 1:13276396-13277158 - 920 13 Yes 77
AlSadhu8-2 3:807549-808169 + 865 ND Yes 79
AlSadhu8-3 2:25942-26642 + 908 8 Yes 77
AlSadhu8-4 8:14602238-14602861 + 875 15 Yes 75
AlSadhu8-5 7:17882685-17884241 + 930** ND Yes 78
AlSadhu8-6 6:17227119-17227908 - 910 ND Yes 77
AlSadhu10-1 3:4473616-4474232 + 918 17 Yes 80
AlSadhu10-2 2:9675105-9675721 + 895 ND Yes 80
  1. *interrupted by 2,028 nt non-Sadhu sequence; **Interrupted by 518 nt non-Sadhu sequence; bp = base pairs; JGI = Joint Genome Institute; ND = not detected; nt = nucleotides.