Table 3 Repeat content in dipteran genomes
From: Diversity of transposable elements and repeats in a 600 kb region of the fly Calliphora vicina
% Genome | Class I | Class II | ||||||
|---|---|---|---|---|---|---|---|---|
Species | Genome size | All TEs | LTR | Non-LTR (LINE) | DNA (TIR) | Helitron | Other | Unclassified |
Drosophila melanogaster | 180 Mb | 6%1 | 4.20%1 | 1.38%1 | 0.30%1 | - | 0.12%1 | - |
Drosophila ananassae | 231 Mb | 25%1 | 15.5%1 | 7.00%1 | 1.25%1 | - | 1.25%1 | - |
Drosophila virilis | 206 Mb | 14%1 | 9.94%1 | 3.36%1 | 0.28%1 | - | 0.42%1 | - |
Drosophila grimshawii | 200 Mb | 3%1 | 1.53%1 | 0.66%1 | 0.57%1 | - | 0.24%1 | - |
Calliphora vicina (600 kb region) | 750 Mb | 24%* | 3.54% | 2.95% | 7.86% | 5.01% | - | 5.24% |
Anopheles gambiae | 278 Mb | 16%2 | 2.64%4 | 3.75%4 | 4.54%4 | 0.11%4 | - | - |
Aedes aegypty | 1,376 Mb | 47%3 | 12.41%4 | 12.67%4 | 13.97%4 | 1.26%4 | - | - |
Culex quinquefasciatus | 579 Mb | 28%4 | 3.89%4 | 4.45%4 | 19.40%4 | 0.49%4 | - | - |